I guess your index.tape can be as simple as "00<lf>01<lf> and so on.."
WinUAE does not sort files alphabetically, it just reads then in whatever order system returns the directory and usually it isn't sorted.
No ideas for corrupted packages. It is always possible that there are some corner case in tape emulation. But first I'd like to know if we even have 100% confirmed original intact tape install packages for 2.01 and 2.03.
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