I wouldn't trust that version too much yet..
Also changelog explains another (more likely) reason that almost guarantees different timing in non-ce 68000 modes compared to old versions. In non-ce mode 68000 cycle counting was mostly approximate. Now it is fully accurate. (It means: if program runs in fast ram and it never accesses chip ram, both ce mode and non-ce 68000 will have 100% exact same timing.)
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